FilterMs1WindowSelection Class Reference

try to detect complementary ions and assign maximum intensity of both elements More...

#include <filterms1windowselection.h>

Inheritance diagram for FilterMs1WindowSelection:

Public Member Functions
	FilterMs1WindowSelection (const pappso::cbor::mzcbor::QcborSpectrumPrecursor &precursor)
	FilterMs1WindowSelection (const FilterMs1WindowSelection &other)
virtual	~FilterMs1WindowSelection ()
pappso::Trace &	filter (pappso::Trace &data_points) const override
Public Member Functions inherited from pappso::FilterInterface
virtual	~FilterInterface ()

Private Attributes
double	m_targetMz = 0
double	m_lowerMz = 0
double	m_upperMz = 0

Detailed Description

try to detect complementary ions and assign maximum intensity of both elements

experimental filter

Definition at line 44 of file filterms1windowselection.h.

Constructor & Destructor Documentation

FilterMs1WindowSelection() [1/2]

FilterMs1WindowSelection::FilterMs1WindowSelection

(

const pappso::cbor::mzcbor::QcborSpectrumPrecursor &

precursor

)

Parameters

target_mz	the targeted mass of the peak pair
precision_ptr	matching precision

Definition at line 36 of file filterms1windowselection.cpp.

{
  qDebug();
  pappso::cbor::mzcbor::IsolationWindow isolation_window = precursor.getIsolationWindow();
  m_targetMz                                             = isolation_window.getTargetMz();
  m_lowerMz                                              = isolation_window.getLowerMz();
  m_upperMz                                              = isolation_window.getUpperMz();
 
 
  if((m_upperMz == 0) || (m_lowerMz == 0))
    {
      throw pappso::ExceptionNotPossible(
        QObject::tr("ERROR: unable to find isolation Window in precursor"));
    }
}

References pappso::cbor::mzcbor::QcborSpectrumPrecursor::getIsolationWindow(), pappso::cbor::mzcbor::IsolationWindow::getLowerMz(), pappso::cbor::mzcbor::IsolationWindow::getTargetMz(), pappso::cbor::mzcbor::IsolationWindow::getUpperMz(), m_lowerMz, m_targetMz, and m_upperMz.

Referenced by FilterMs1WindowSelection().

FilterMs1WindowSelection() [2/2]

FilterMs1WindowSelection::FilterMs1WindowSelection

(

const FilterMs1WindowSelection &

other

)

Copy constructor

Parameters

other

TODO

Definition at line 53 of file filterms1windowselection.cpp.

  : m_targetMz(other.m_targetMz), m_lowerMz(other.m_lowerMz), m_upperMz(other.m_upperMz)
{
}

References FilterMs1WindowSelection(), m_lowerMz, m_targetMz, and m_upperMz.

~FilterMs1WindowSelection()

FilterMs1WindowSelection::~FilterMs1WindowSelection ( )

virtual

Destructor

Definition at line 61 of file filterms1windowselection.cpp.

{
}

Member Function Documentation

filter()

pappso::Trace & FilterMs1WindowSelection::filter ( pappso::Trace & data_points ) const

overridevirtual

Implements pappso::FilterInterface.

Definition at line 67 of file filterms1windowselection.cpp.

{
  pappso::FilterResampleKeepSmaller(m_upperMz).filter(data_points);
  pappso::FilterResampleKeepGreater(m_lowerMz).filter(data_points);
  return data_points;
}

References pappso::FilterResampleKeepGreater::filter(), pappso::FilterResampleKeepSmaller::filter(), m_lowerMz, and m_upperMz.

Referenced by pappso::cbor::mzcbor::MzcborPrecursorFinder::findPotentialPrecursorIonData().

Member Data Documentation

m_lowerMz

double FilterMs1WindowSelection::m_lowerMz = 0

private

Definition at line 70 of file filterms1windowselection.h.

Referenced by FilterMs1WindowSelection(), FilterMs1WindowSelection(), and filter().

m_targetMz

double FilterMs1WindowSelection::m_targetMz = 0

private

Definition at line 69 of file filterms1windowselection.h.

Referenced by FilterMs1WindowSelection(), and FilterMs1WindowSelection().

m_upperMz

double FilterMs1WindowSelection::m_upperMz = 0

private

Definition at line 71 of file filterms1windowselection.h.

Referenced by FilterMs1WindowSelection(), FilterMs1WindowSelection(), and filter().

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The documentation for this class was generated from the following files:

• pappsomspp/core/processing/cbor/mzcbor/copyreplace/filterms1windowselection.h
• pappsomspp/core/processing/cbor/mzcbor/copyreplace/filterms1windowselection.cpp